Installation

Get the code

• Ensure you have the version control system git installed on your machine.
• Ensure that you have python installed on your machine, at least version 2.7 or 3.4.
• Clone the repository:
  • git clone git://github.com/Radiomics/pyradiomics

Installation on your system

• For unix like systems (MacOSX, linux):

  • cd pyradiomics
  • python -m pip install -r requirements.txt
  • python setup.py install

  To use your build for interactive use and development: * python setup.py develop

  • If you don’t have sudo/admin rights on your machine, you need to locally install numpy, nose, tqdm, PyWavelets, SimpleITK (specified in requirements.txt). In a bash shell:

    pip install --user --upgrade pip
    export PATH=$HOME/.local/bin:$PATH
    pip install --user -r requirements.txt
    export PYTHONPATH=$HOME/.local/lib64/python2.7/site-packages
    

• For Windows:

  • cd pyradiomics
  • python -m pip install -r requirements.txt
  • python setup.py install